Refactor code structure for improved readability and maintainability

.devcontainer/devcontainer.json

@@ -1,26 +0,0 @@
-{
-  "name": "brunix-assistance-engine",
-  "dockerComposeFile": "../docker-compose.yaml",
-  "service": "brunix-engine",
-  "workspaceFolder": "/workspace",
-  "remoteUser": "root",
-  "runArgs": [
-    "--add-host",
-    "host.docker.internal:host-gateway"
-  ],
-  "customizations": {
-    "vscode": {
-      "extensions": [
-        "ms-python.python",
-        "ms-python.vscode-pylance",
-        "ms-python.debugpy",
-        "astral-sh.ruff",
-        "ms-python.black-formatter",
-        "njpwerner.autodocstring"
-      ],
-      "settings": {
-        "python.defaultInterpreterPath": "/usr/local/bin/python"
-      }
-    }
-  }
-}

.vscode/settings.json

@@ -1,22 +0,0 @@
-{
-    "makefile.configureOnOpen": false,
-    "python-envs.pythonProjects": [],
-    "python.terminal.useEnvFile": true,
-    "python.envFile": "${workspaceFolder}/.env",
-    "jupyter.logging.level": "info",
-    "terminal.integrated.env.linux": {
-        "PYTHONPATH": "${workspaceFolder}:${env:PYTHONPATH}"
-    },
-    "python.analysis.ignore": [
-        "*"
-    ], // Disables Pylance's native linting
-    "python.analysis.typeCheckingMode": "basic", // Keeps Pylance's type validation
-    "[python]": {
-        "editor.defaultFormatter": "charliermarsh.ruff",
-        "editor.formatOnSave": true,
-        "editor.codeActionsOnSave": {
-            "source.fixAll.ruff": "explicit",
-            "source.organizeImports.ruff": "explicit"
-        }
-    }
-}

pyproject.toml

@@ -17,3 +17,9 @@ dependencies = [
     "python-dotenv>=1.2.1",
     "tqdm>=4.67.3",
 ]
+
+[dependency-groups]
+dev = [
+    "jupyter>=1.1.1",
+    "ruff>=0.15.1",
+]